MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,771
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 1,841
Total number of protein coding genes annotated/found:
1,771
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5026|JADGKX010000011.1
SEQF5026_00107
Genome Viewer
NA
AA
762/254
1008-247
putative iron export permease protein FetB
SEQF5026|JADGKX010000011.1
SEQF5026_00108
Genome Viewer
NA
AA
654/218
1639-986
putative iron export ATP-binding protein FetA
SEQF5026|JADGKX010000011.1
SEQF5026_00109
Genome Viewer
NA
AA
201/67
1936-1736
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00110
Genome Viewer
NA
AA
1083/361
3018-1936
Putative aminopeptidase YsdC
SEQF5026|JADGKX010000011.1
SEQF5026_00111
Genome Viewer
NA
AA
582/194
3317-3898
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00112
Genome Viewer
NA
AA
411/137
3978-4388
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00113
Genome Viewer
NA
AA
213/71
4421-4633
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00114
Genome Viewer
NA
AA
1212/404
4614-5825
Staphyloferrin B transporter
SEQF5026|JADGKX010000011.1
SEQF5026_00115
Genome Viewer
NA
AA
1374/458
7288-5915
putative transporter
SEQF5026|JADGKX010000011.1
SEQF5026_00116
Genome Viewer
NA
AA
1839/613
7625-9463
Histidine decarboxylase
SEQF5026|JADGKX010000011.1
SEQF5026_00117
Genome Viewer
NA
AA
1437/479
9483-10919
putative glutamate/gamma-aminobutyrate antiporter
SEQF5026|JADGKX010000011.1
SEQF5026_00118
Genome Viewer
NA
AA
1650/550
11435-13084
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00119
Genome Viewer
NA
AA
1326/442
13118-14443
Aminopeptidase C
SEQF5026|JADGKX010000011.1
SEQF5026_00120
Genome Viewer
NA
AA
1425/475
14477-15901
Dipeptidase A
SEQF5026|JADGKX010000011.1
SEQF5026_00121
Genome Viewer
NA
AA
1662/554
15970-17631
Glutamate/gamma-aminobutyrate antiporter
SEQF5026|JADGKX010000011.1
SEQF5026_00122
Genome Viewer
NA
AA
1326/442
17658-18983
Aminopeptidase C
SEQF5026|JADGKX010000011.1
SEQF5026_00123
Genome Viewer
NA
AA
1356/452
19017-20372
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00124
Genome Viewer
NA
AA
621/207
21082-20462
hypothetical protein
SEQF5026|JADGKX010000011.1
SEQF5026_00125
Genome Viewer
NA
AA
921/307
22143-21223
Glutaminase 2
SEQF5026|JADGKX010000011.1
SEQF5026_00126
Genome Viewer
NA
AA
1428/476
23705-22278
6-phospho-beta-galactosidase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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